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科学家发现哺乳动物细胞中病毒辅助的强化抑制tRNA的定向演化
作者:小柯机器人 发布时间:2022/12/28 17:43:29

美国波士顿学院Abhishek Chatterjee课题组发现哺乳动物细胞中病毒辅助的强化抑制tRNA的定向演化。这一研究成果于2022年12月22日在线发表在国际学术期刊《自然—方法学》上。

研究人员报告了在哺乳动物细胞中的病毒辅助的tRNA定向演化(VADER),它使用一个双筛选择方案来促进单步从初始库中富集活性但正交的tRNA突变体。通过利用VADER,研究人员开发了Methanosarcina mazei pyrrolysyl-tRNA的改进突变体,以及一种细菌性酪酪氨酰-tRNA。研究人员还表明,最有效的突变体pyrrolysyl-tRNA的更高活性对哺乳动物细胞是特异性的,这意味着与独特哺乳动物翻译装置的互动得到了改善。
 
据了解,活细胞中非天然氨基酸(Uaas)的位点特异性结合依赖于从遥远的生命领域中借来的工程化的氨基酸转移RNA合成酶-tRNA对。这种异源的抑制性tRNA通常具有较差的内在活性,可能是由于与非原生翻译系统的互动不理想。这种限制可以在大肠杆菌中用定向演化来解决。然而,目前还没有合适的选择系统可以在哺乳动物细胞中做同样的事情。
 
附:英文原文

Title: Virus-assisted directed evolution of enhanced suppressor tRNAs in mammalian cells

Author: Jewel, Delilah, Kelemen, Rachel E., Huang, Rachel L., Zhu, Zeyu, Sundaresh, Bharathi, Cao, Xiaofu, Malley, Kaitlin, Huang, Zeyi, Pasha, Muhammad, Anthony, Jon, van Opijnen, Tim, Chatterjee, Abhishek

Issue&Volume: 2022-12-22

Abstract: Site-specific incorporation of unnatural amino acids (Uaas) in living cells relies on engineered aminoacyl-transfer RNA synthetase–tRNA pairs borrowed from a distant domain of life. Such heterologous suppressor tRNAs often have poor intrinsic activity, presumably due to suboptimal interaction with a non-native translation system. This limitation can be addressed in Escherichia coli using directed evolution. However, no suitable selection system is currently available to do the same in mammalian cells. Here we report virus-assisted directed evolution of tRNAs (VADER) in mammalian cells, which uses a double-sieve selection scheme to facilitate single-step enrichment of active yet orthogonal tRNA mutants from naive libraries. Using VADER we developed improved mutants of Methanosarcina mazei pyrrolysyl-tRNA, as well as a bacterial tyrosyl-tRNA. We also show that the higher activity of the most efficient mutant pyrrolysyl-tRNA is specific for mammalian cells, alluding to an improved interaction with the unique mammalian translation apparatus.

DOI: 10.1038/s41592-022-01706-w

Source: https://www.nature.com/articles/s41592-022-01706-w

 

期刊信息

Nature Methods:《自然—方法学》,创刊于2004年。隶属于施普林格·自然出版集团,最新IF:47.99
官方网址:https://www.nature.com/nmeth/
投稿链接:https://mts-nmeth.nature.com/cgi-bin/main.plex