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研究揭示真核核糖体易位的精确机制
作者:小柯机器人 发布时间:2021/12/5 13:09:32

法国斯特拉斯堡大学Gulnara Yusupova、Marat Yusupov等研究人员合作揭示真核核糖体易位的精确机制。2021年12月1日,《自然》杂志在线发表了这项成果。

研究人员表示,遗传密码向蛋白质的转化是通过信使RNA(mRNA)和转运RNA(tRNA)在核糖体上的重复同步易位实现的。在真核生物中,易位是由延伸因子2(eEF2)保证的,它催化这一过程并积极促进其准确性。尽管许多研究指出,eEF2中保守的真核生物翻译后修饰diphthamide和tRNA修饰在支持易位的准确性方面起着关键作用,但描述其具体功能的详细分子机制却不为人所知。
 
研究人员报道了真核生物80S核糖体在含有mRNA、自然修饰的eEF2和tRNA的易位中间状态的高分辨率X射线结构。该晶体结构揭示了一个稳定密码子-反密码子相互作用的网络,涉及diphthamide和苯丙氨酸tRNA第37位的超修饰核苷怀丁苷,它也已知能够提高翻译的准确性。该模型展示了解码中心如何释放密码子和反密码子双链,使其在核糖体上移动,并强调了eEF2作为定义翻译方向性的"棘爪"功能。这个模型揭示了80S核糖体、eEF2和tRNA的真核生物特定元素如何进行大规模的分子重组,从而确保在复杂的易位过程中维持mRNA阅读框架。
 
附:英文原文

Title: Accuracy mechanism of eukaryotic ribosome translocation

Author: Djumagulov, Muminjon, Demeshkina, Natalia, Jenner, Lasse, Rozov, Alexey, Yusupov, Marat, Yusupova, Gulnara

Issue&Volume: 2021-12-01

Abstract: Translation of the genetic code into proteins is realized through repetitions of synchronous translocation of messenger RNA (mRNA) and transfer RNAs (tRNA) through the ribosome. In eukaryotes translocation is ensured by elongation factor 2 (eEF2), which catalyses the process and actively contributes to its accuracy1. Although numerous studies point to critical roles for both the conserved eukaryotic posttranslational modification diphthamide in eEF2 and tRNA modifications in supporting the accuracy of translocation, detailed molecular mechanisms describing their specific functions are poorly understood. Here we report a high-resolution X-ray structure of the eukaryotic 80S ribosome in a translocation-intermediate state containing mRNA, naturally modified eEF2 and tRNAs. The crystal structure reveals a network of stabilization of codon–anticodon interactions involving diphthamide1 and the hypermodified nucleoside wybutosine at position 37 of phenylalanine tRNA, which is also known to enhance translation accuracy2. The model demonstrates how the decoding centre releases a codon–anticodon duplex, allowing its movement on the ribosome, and emphasizes the function of eEF2 as a ‘pawl’ defining the directionality of translocation3. This model suggests how eukaryote-specific elements of the 80S ribosome, eEF2 and tRNAs undergo large-scale molecular reorganizations to ensure maintenance of the mRNA reading frame during the complex process of translocation.

DOI: 10.1038/s41586-021-04131-9

Source: https://www.nature.com/articles/s41586-021-04131-9

期刊信息

Nature:《自然》,创刊于1869年。隶属于施普林格·自然出版集团,最新IF:43.07
官方网址:http://www.nature.com/
投稿链接:http://www.nature.com/authors/submit_manuscript.html