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科学家绘制出人类和小鼠肠神经系统的单细胞图谱
作者:小柯机器人 发布时间:2020/9/5 15:54:43

美国麻省理工学院Aviv Regev等研究人员合作绘制出单细胞分辨率下的人类和小鼠肠神经系统(ENS)图谱。2020年9月3日,《细胞》杂志在线发表了这项成果。

研究人员开发了两种方法,能够以单细胞分辨率对成年小鼠和人类的ENS进行分析:RAISIN RNA-seq用核糖体结合的mRNA谱分析完整的细胞核,而MIRACL-seq则通过基于液滴的无标签富集稀有细胞类型分析。小鼠图谱中的1,187,535个核包括来自回肠和结肠的5,068个神经元,这些细胞显示出非同寻常的神经元多样性。
 
研究人员强调了肠神经元中昼夜节律的表达变化,这表明与疾病相关的基因随着衰老失调,并确定了回肠和近端/远端结肠之间的差异。
 
在人类中,研究人员分析了436,202个核,鉴定了1,445个神经元,并确定了保守的和物种特异性的转录程序以及可能的神经上皮、神经基质和神经免疫相互作用。人类ENS表达神经性、炎性和肠外疾病的风险基因,进而提示了神经元对疾病的贡献。
 
据悉,ENS协调肠道中的各种功能,但由于细胞的稀有性和多样性而无法进行全面的分子表征。
 
附:英文原文

Title: The Human and Mouse Enteric Nervous System at Single-Cell Resolution

Author: Eugene Drokhlyansky, Christopher S. Smillie, Nicholas Van Wittenberghe, Maria Ericsson, Gabriel K. Griffin, Gokcen Eraslan, Danielle Dionne, Michael S. Cuoco, Max N. Goder-Reiser, Tatyana Sharova, Olena Kuksenko, Andrew J. Aguirre, Genevieve M. Boland, Daniel Graham, Orit Rozenblatt-Rosen, Ramnik J. Xavier, Aviv Regev

Issue&Volume: 2020-09-03

Abstract: The enteric nervous system (ENS) coordinates diverse functions in the intestine buthas eluded comprehensive molecular characterization because of the rarity and diversityof cells. Here we develop two methods to profile the ENS of adult mice and humansat single-cell resolution: RAISIN RNA-seq for profiling intact nuclei with ribosome-boundmRNA and MIRACL-seq for label-free enrichment of rare cell types by droplet-basedprofiling. The 1,187,535 nuclei in our mouse atlas include 5,068 neurons from theileum and colon, revealing extraordinary neuron diversity. We highlight circadianexpression changes in enteric neurons, show that disease-related genes are dysregulatedwith aging, and identify differences between the ileum and proximal/distal colon.In humans, we profile 436,202 nuclei, recovering 1,445 neurons, and identify conservedand species-specific transcriptional programs and putative neuro-epithelial, neuro-stromal,and neuro-immune interactions. The human ENS expresses risk genes for neuropathic,inflammatory, and extra-intestinal diseases, suggesting neuronal contributions todisease.

DOI: 10.1016/j.cell.2020.08.003

Source: https://www.cell.com/cell/fulltext/S0092-8674(20)30994-6

期刊信息
Cell:《细胞》,创刊于1974年。隶属于细胞出版社,最新IF:36.216
官方网址:https://www.cell.com/