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新技术揭示人类基因组复制时的姐妹染色单体构象
作者:小柯机器人 发布时间:2020/9/24 11:27:39

奥地利科学院Daniel W. Gerlich、Michael Mitter等研究人员合作揭示人类基因组复制时的姐妹染色单体构象。相关论文于2020年9月23日在线发表在《自然》杂志上。

研究人员报道了姐妹染色单体敏感的Hi-C(scsHi-C)技术,它是基于用4-硫代胸腺嘧啶核苷和核苷转化化学标记新生DNA。人类染色体的全基因组构象图谱显示,姐妹染色单体对在拓扑关联域(TAD)的边界上相互作用最频繁。动态粘连蛋白池的连续加载将TAD内部的姐妹染色单体对分开,并且需要将姐妹染色单体接触集中在TAD边界处。研究人员确定了总体上高度配对的TAD亚群,其特征是兼性异染色质和绝缘的拓扑结构域,这些结构域分别在单个姐妹染色单体内形成。姐妹染色单体拓扑的丰富模式以及这一scsHi-C技术将使人们有可能研究相同DNA分子之间的物理相互作用如何促进DNA修复、基因表达、染色体分离以及潜在的其他生物学过程。
 
据了解,基因组的三维组织支持有丝分裂过程中调控的基因表达、重组、DNA修复和染色体分离。染色体构象捕获(Hi-C)技术揭示了脊椎动物细胞中内部染色体结构的复杂基因组格局,但姐妹染色单体的相同序列使其难以确定其拓扑结构在复制的染色体中相互作用。
 
附:英文原文

Title: Conformation of sister chromatids in the replicated human genome

Author: Michael Mitter, Catherina Gasser, Zsuzsanna Takacs, Christoph C. H. Langer, Wen Tang, Gregor Jessberger, Charlie T. Beales, Eva Neuner, Stefan L. Ameres, Jan-Michael Peters, Anton Goloborodko, Ronald Micura, Daniel W. Gerlich

Issue&Volume: 2020-09-23

Abstract: The three-dimensional organization of the genome supports regulated gene expression, recombination, DNA repair, and chromosome segregation during mitosis. Chromosome conformation capture (Hi-C)1,2 analysis has revealed a complex genomic landscape of internal chromosomal structures in vertebrate cells3,4,5,6,7, but the identical sequence of sister chromatids has made it difficult to determine how they topologically interact in replicated chromosomes. Here we describe sister-chromatid-sensitive Hi-C (scsHi-C), which is based on labelling of nascent DNA with 4-thio-thymidine and nucleoside conversion chemistry. Genome-wide conformation maps of human chromosomes reveal that sister-chromatid pairs interact most frequently at the boundaries of topologically associating domains (TADs). Continuous loading of a dynamic cohesin pool separates sister-chromatid pairs inside TADs and is required to focus sister-chromatid contacts at TAD boundaries. We identified a subset of TADs that are overall highly paired and are characterized by facultative heterochromatin and insulated topological domains that form separately within individual sister chromatids. The rich pattern of sister-chromatid topologies and our scsHi-C technology will make it possible to investigate how physical interactions between identical DNA molecules contribute to DNA repair, gene expression, chromosome segregation, and potentially other biological processes.

DOI: 10.1038/s41586-020-2744-4

Source: https://www.nature.com/articles/s41586-020-2744-4

期刊信息

Nature:《自然》,创刊于1869年。隶属于施普林格·自然出版集团,最新IF:43.07
官方网址:http://www.nature.com/
投稿链接:http://www.nature.com/authors/submit_manuscript.html