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神经内分泌肿瘤的类器官生物库可以进行基因型表型定位
作者:小柯机器人 发布时间:2020/11/9 22:19:23

日庆应义塾大学Toshiro Sato小组构建了神经内分泌肿瘤的类器官生物库。2020年11月6日,国际知名学术期刊《细胞》在线发表了这一成果。

据研究人员介绍,由神经内分泌肿瘤和神经内分泌癌(NEC)组成的胃肠胰腺(GEP)神经内分泌肿瘤(NEN)由于其稀有性,是一种致死性但研究不深的疾病。
 
为了填补GEP-NEN临床相关模型的不足,研究人员建立了25个NEN类器官,并对其进行了全面的分子表征。GEP-NEN类器官概括了原始肿瘤的病理组织学和功能表型。全基因组测序显示,GEP-NEC中TP53和RB1频繁发生基因改变,GEP-NEN中特征性的全染色体杂合性丧失。转录组分析确定了以不同转录因子表达为特征的分子亚型。
 
无论基因突变如何,GEP-NEN类器官都从干细胞微环境中获得独立性。TP53和RB1的复合敲除,以及关键转录因子的过表达,赋予了与GEP-NEN生物学相近的正常结肠上皮表型。
 
总而言之,这项研究不仅提供了对GEP-NEN的遗传学理解,还联系了它的遗传学和生物学表型。
 
附:英文原文

Title: An Organoid Biobank of Neuroendocrine Neoplasms Enables Genotype-Phenotype Mapping

Author: Kenta Kawasaki, Kohta Toshimitsu, Mami Matano, Masashi Fujita, Masayuki Fujii, Kazuhiro Togasaki, Toshiki Ebisudani, Mariko Shimokawa, Ai Takano, Sirirat Takahashi, Yuki Ohta, Kosaku Nanki, Ryo Igarashi, Kazuhiro Ishimaru, Hiroki Ishida, Yasutaka Sukawa, Shinya Sugimoto, Yoshimasa Saito, Kazuhiro Maejima, Shota Sasagawa, Hwajin Lee, Hong-Gee Kim, Kyungsik Ha, Junko Hamamoto, Koichi Fukunaga, Aya Maekawa, Minoru Tanabe, Soichiro Ishihara, Yasuo Hamamoto, Hiroyuki Yasuda, Shigeki Sekine, Atsushi Kudo, Yuko Kitagawa, Takanori Kanai, Hidewaki Nakagawa, Toshiro Sato

Issue&Volume: 2020-11-06

Abstract: Gastroenteropancreatic (GEP) neuroendocrine neoplasm (NEN) that consists of neuroendocrinetumor and neuroendocrine carcinoma (NEC) is a lethal but under-investigated disease owing to its rarity. To fill the scarcity of clinically relevant models of GEP-NEN,we here established 25 lines of NEN organoids and performed their comprehensive molecularcharacterization. GEP-NEN organoids recapitulated pathohistological and functionalphenotypes of the original tumors. Whole-genome sequencing revealed frequent geneticalterations in TP53 and RB1 in GEP-NECs, and characteristic chromosome-wide loss of heterozygosity in GEP-NENs.Transcriptome analysis identified molecular subtypes that are distinguished by theexpression of distinct transcription factors. GEP-NEN organoids gained independencefrom the stem cell niche irrespective of genetic mutations. Compound knockout of TP53and RB1, together with overexpression of key transcription factors, conferred on thenormal colonic epithelium phenotypes that are compatible with GEP-NEN biology. Altogether,our study not only provides genetic understanding of GEP-NEN, but also connects itsgenetics and biological phenotypes.

DOI: 10.1016/j.cell.2020.10.023

Source: https://www.cell.com/cell/fulltext/S0092-8674(20)31387-8

期刊信息
Cell:《细胞》,创刊于1974年。隶属于细胞出版社,最新IF:36.216
官方网址:https://www.cell.com/