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COVID-19患者的病毒表位分析显示交叉反应性并与严重程度相关
作者:小柯机器人 发布时间:2020/9/30 23:23:01

美国哈佛医学院Stephen J. Elledge研究小组发现,COVID-19患者的病毒表位分析可显示交叉反应性并与严重程度相关。这一研究成果于2020年9月29日在线发表在国际学术期刊《科学》上。

使用VirScan对232名COVID-19患者和190名COVID-19前的对照进行了深入血清学分析,研究人员发现SARS-CoV-2蛋白质组中有800多个表位,其中包括10个可能被中和抗体识别的表位。对照中预先存在的抗体识别SARS-CoV-2 ORF1,而只有COVID-19患者主要识别刺突和核蛋白。
 
在VirScan数据上训练的机器学习模型以99%的敏感性和98%的特异性预测了SARS-CoV-2的暴露史;利用最具区分性的SARS-CoV-2多肽开发了一种基于Luminex的快速诊断方法。严重COVID-19的个体表现出更强和更广的SARS-CoV-2反应,对先前感染的抗体反应较弱,而且CMV和HSV-1的发生率较高,这可能受人口统计学变量影响。在住院患者中,男性比女性对SARS-CoV-2具有更大的抗体反应。
 
据悉,了解SARS-CoV-2体液反应对于改善诊断、治疗和疫苗至关重要。
 
附:英文原文

Title: Viral epitope profiling of COVID-19 patients reveals cross-reactivity and correlates of severity

Author: Ellen Shrock, Eric Fujimura, Tomasz Kula, Richard T. Timms, I-Hsiu Lee, Yumei Leng, Matthew L. Robinson, Brandon M. Sie, Mamie Z. Li, Yuezhou Chen, Jennifer Logue, Adam Zuiani, Denise McCulloch, Felipe J. N. Lelis, Stephanie Henson, Daniel R. Monaco, Meghan Travers, Shaghayegh Habibi, William A. Clarke, Patrizio Caturegli, Oliver Laeyendecker, Alicja Piechocka-Trocha, Jon Li, Ashok Khatri, Helen Y. Chu, MGH COVID- Collection &, Alexandra-Chloé Villani, Kyle Kays, Marcia B. Goldberg, Nir Hacohen, Michael R. Filbin, Xu G. Yu, Bruce D. Walker, Duane R. Wesemann, H. Benjamin Larman, James A. Lederer, Stephen J. Elledge

Issue&Volume: 2020/09/29

Abstract: Understanding humoral responses to SARS-CoV-2 is critical for improving diagnostics, therapeutics, and vaccines. Deep serological profiling of 232 COVID-19 patients and 190 pre-COVID-19 era controls using VirScan revealed over 800 epitopes in the SARS-CoV-2 proteome, including 10 epitopes likely recognized by neutralizing antibodies. Pre-existing antibodies in controls recognized SARS-CoV-2 ORF1, while only COVID-19 patients primarily recognized spike and nucleoprotein. A machine learning model trained on VirScan data predicted SARS-CoV-2 exposure history with 99% sensitivity and 98% specificity; a rapid Luminex-based diagnostic was developed from the most discriminatory SARS-CoV-2 peptides. Individuals with more severe COVID-19 exhibited stronger and broader SARS-CoV-2 responses, weaker antibody responses to prior infections, and higher incidence of CMV and HSV-1, possibly influenced by demographic covariates. Among hospitalized patients, males make greater SARS-CoV-2 antibody responses than females.

DOI: 10.1126/science.abd4250

Source: https://science.sciencemag.org/content/early/2020/09/28/science.abd4250

期刊信息
Science:《科学》,创刊于1880年。隶属于美国科学促进会,最新IF:41.037